Return to main results Retrieve Phyre Job Id

Job DescriptionQ47274
Confidence45.52%DateThu Jan 5 12:36:44 GMT 2012
Rank407Aligned Residues42
% Identity10%Templated1s3ja_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70........ .80.........90.........100....
Predicted Secondary structure 



.




Query SS confidence 















.

























Query Sequence  NNSDLHDLLVDYYVVG. MTFMSLAGKHCCSDGYIGKRLQKAEG
Query Conservation    
    

 
 
  
. 
  


  
 

  


 

  

 
Alig confidence 















.

























Template Conservation 

  
   
  
      
  


  
 
    

  
  
  
Template Sequence  VTPAQLFVLASLKKHGSLKVSEIAERXEVKPSAVTLXADRLEQ
Template Known Secondary structure 

STS
Template Predicted Secondary structure 









Template SS confidence 










































   35....40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions