Return to main results Retrieve Phyre Job Id

Job DescriptionQ47274
Confidence53.69%DateThu Jan 5 12:36:44 GMT 2012
Rank337Aligned Residues44
% Identity7%Templated1j1va_
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Chromosomal replication initiation factor DnaA C-terminal domain IV
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80......... 90.........100........
Predicted Secondary structure 




.

Query SS confidence 
























.


















Query Sequence  SDLHDLLVDYYVVGMTFMSLAGKHC. CSDGYIGKRLQKAEGIIEG
Query Conservation 
    

 
 
  
 
  


  
 .

  


 

  

  
 
Alig confidence 
























.


















Template Conservation 

 




 
     

  

  

 





  
  

      
Template Sequence  PRQXAXALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
Template Known Secondary structure  S


TTS

Template Predicted Secondary structure 






Template SS confidence 












































   406...410.........420.........430.........440.........450
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions