Return to main results Retrieve Phyre Job Id

Job DescriptionQ47274
Confidence51.34%DateThu Jan 5 12:36:44 GMT 2012
Rank359Aligned Residues40
% Identity18%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100....
Predicted Secondary structure 






Query SS confidence 







































Query Sequence  SDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEG
Query Conservation 
    

 
 
  
 
  


  
 

  


 

  

 
Alig confidence 







































Template Conservation       

       
 
  

     
   
 
 

   
Template Sequence  RDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTG
Template Known Secondary structure  TTSSSS


TTTSS
S
Template Predicted Secondary structure 









Template SS confidence 







































   8.10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions