 |
Job Description | Q47274 | Confidence | 61.34% | Date | Thu Jan 5 12:36:44 GMT 2012 |
Rank | 281 | Aligned Residues | 59 |
% Identity | 10% | Template | c1vz0B_ |
PDB info |
PDB header:nuclear protein | Chain: B: PDB Molecule:chromosome partitioning protein parb; |
PDBTitle: chromosome segregation protein spo0j from thermus2 thermophilus
|
Resolution | 2.3 Å |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | C | D | D | D | A | M | I | I | C | G | C | M | A | R | L | K | K | . |
. |
N | N | S | D | L | H | D | L | L | V | D | Y | Y | V | V | G | M | T | F | M | S | L | A | G | K | H | C | C | S | D | G | Y | I | G | K | R | L | Q | K | A | E |
Query Conservation |   |
  |
|
|
|
|   |
|   |
|
|   |   |
|   |   |
|   |   | . | . |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | T | D | R | E | A | L | E | L | A | L | V | E | N | L | Q | R | E | D | L | S | P | V | E | E | A | R | G | Y | Q | A | L | L | E | M | G | L | T | Q | E | E | V | A | R | R | V | G | K | A | R | S | T | V | A | N | A | L | R | L | L | Q |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|