 |
Job Description | P0A6X3 | Confidence | 3.05% | Date | Thu Jan 5 11:04:09 GMT 2012 |
Rank | 100 | Aligned Residues | 21 |
% Identity | 14% | Template | d1laja_ |
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins)
| Positive stranded ssRNA viruses
| Bromoviridae-like VP
|
Resolution | 3.40 |
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | V | S | Q | M | V | Y | K | H | A | I | S | T | V | V | P | S | R | P | V |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|
|
|
Template Sequence |   |
D | G | L | A | V | L | I | Y | Q | H | V | P | T | G | I | Q | P | N | N | K | I |
Template Known Secondary structure |   |
S | S | S |
|
|  |  |  |
|
|
| S | S | S | S |
|
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|