 |
| Job Description | P0A6X3 | | Confidence | 18.53% | Date | Thu Jan 5 11:04:09 GMT 2012 |
| Rank | 47 | Aligned Residues | 27 |
| % Identity | 19% | Template | d1f15a_ |
| SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins)
| Positive stranded ssRNA viruses
| Bromoviridae-like VP
|
| Resolution | 3.20 |
|
| | |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | |  |
|
|
| | | |
|
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | V | Y | K | H | A | I | S | T | V | V | P | S | R | P | V | S | H | H | S | N | N | A | G | G | G | T |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
| |
| | | |
| | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
|
|
|
|
|
| Template Sequence | |
L | V | Y | Q | Y | A | A | S | G | V | Q | A | N | N | K | L | L | Y | D | L | S | A | M | R | A | D | I |
| Template Known Secondary structure | |
| | |
|
|
| S | T | T | T | S |
|
| S |
|
|
|
| B | G | G | G | G |
| | |  |
| Template Predicted Secondary structure | |
| | | | |
|
|
|
|
|
|
|
|
| | | | | | |
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
