Job Description P0A6X3 Confidence 100.00% Date Thu Jan 5 11:04:09 GMT 2012 Rank 4 Aligned Residues 65 % Identity 45% Template c3hsbB_ PDB info PDB header:rna binding protein/rna Chain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		S	L	Q	D	P	F	L	N	A	L	R	R	E	R	V	P	V	S	I	Y	L	V	N	G	I	K	L	Q	G	Q	I	E	S	F	D	Q	F	V	I	L	L	K	.	N	T	V	S	Q	M	V	Y	K	H	A	I	S	T	V	V	P	S	R	P	V	S	H
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		N	I	Q	D	Q	F	L	N	Q	I	R	K	E	N	T	Y	V	T	V	F	L	L	N	G	F	Q	L	R	G	Q	V	K	G	F	D	N	F	T	V	L	L	E	S	E	G	K	Q	Q	L	I	Y	K	H	A	I	S	T	F	A	P	Q	K	N	V	Q	L
Template Known Secondary structure														T	T								T	T	S												S	S							T	T							G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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