 |
Job Description | P0A6X3 | Confidence | 3.11% | Date | Thu Jan 5 11:04:09 GMT 2012 |
Rank | 97 | Aligned Residues | 46 |
% Identity | 11% | Template | c2qqsB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:jmjc domain-containing histone demethylation |
PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
|
Resolution | 2.82 Å |
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | R | V | P | V | S | I | Y | L | V | N | G | I | K | L | Q | G | Q | I | E | S | F | . |
. |
. |
D | Q | F | V | I | L | L | K | N | T | V | S | Q | M | V | Y | K | H | A | I | S | T | V |
Query Conservation |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
| . | . | . |
|   |
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |
|   |
|   |   |
|
|   |   |
Template Sequence |   |
A | E | G | E | V | V | Q | V | R | W | T | D | G | Q | V | Y | G | A | K | F | V | A | S | H | P | I | Q | M | Y | Q | V | E | F | E | D | G | S | Q | L | V | V | K | R | D | D | V | Y | T | L |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  | G | G | G |
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
958 | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|