Job Description P09551 Confidence 99.95% Date Thu Jan 5 11:02:25 GMT 2012 Rank 34 Aligned Residues 216 % Identity 15% Template d2f34a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.													.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	.	.	.	.	.	.	.	G	D	F	V	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	D	F	D	A	L	I	P	S	L	K	A	K	.	.	.	.	.	.	.	.	.	.	.	.	K	I	D
Query Conservation																					.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.												.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		T	L	I	V	T	T	I	.	L	E	E	P	Y	V	M	Y	R	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	L	D	L	L	K	E	L	S	N	I	L	G	F	L	Y	D	V	K	L	V	P	D	G	K	Y	G	A	Q	N	D	K	G	E	W	N	G	M	V	K	E	L	I	D	H	R	A	D
Template Known Secondary structure									.		B	T	T	T	B				S			S				G	G	G	G			S														T									T	T						B		T	T	S		B									T	T	S		S
Template Predicted Secondary structure									.
Template SS confidence
		5	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	I	S	S	L	S	I	T	D	K	R	Q	Q	E	I	A	F	S	D	K	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	D	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	E	T	W	R	.	.	.	.	.	.	.	.	.	.	S	K	G	V
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	V	A	P	L	T	I	T	Y	V	R	E	K	V	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	R	D	G	S	T	M	T	F	F	K	K	S	K	I	S	T	Y	E	K	M	W	A	F	M	S	S	R	Q
Template Known Secondary structure					S	S		B							T	T					S		S															S						T		S	S	S					B	T	T	S																								T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	A	Y	A	N	Q	D	L	V	Y	S	D	L	A	A	G	R	L	D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	D	F	A	F	A	G	S	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	A	E	L	T	A	A	F	N	K	A	L	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.																							.
Template Conservation																																								.	.	.	.	.	.	.	.	.																							.
Template Sequence		Q	S	A	L	V	K	N	S	D	E	G	I	Q	R	V	L	T	T	D	Y	A	L	L	M	E	S	T	S	I	E	Y	V	T	Q	R	N	C	N	.	.	.	.	.	.	.	.	.	L	T	Q	I	G	G	L	I	D	S	K	G	Y	G	V	G	T	P	I	G	S	P	.	Y	R	D	K	I	T	I	A	I	L
Template Known Secondary structure					S	B	S	S											S	S																		T	T	.	.	.	.	.	.	.	.	.					S	S		S	S										T	T		T	.	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	R	Q	D	G	T	Y	D	K	M	A	K	K	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Q	E	E	G	K	L	H	M	M	K	E	K	W	W
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions