Return to main results Retrieve Phyre Job Id

Job DescriptionP09551
Confidence94.96%DateThu Jan 5 11:02:25 GMT 2012
Rank62Aligned Residues185
% Identity14%Templated2czla1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGST
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Template Sequence  PVPLEPVLEDVETLNRWALEGRLPLTKLSYAAYAQVRDRYVALRSGGALGRGVGPLVVAR. . GPLQALEGLRVAVPGRHT
Template Known Secondary structure  SS


TT

STT
TTT
SSS
SS


S..S

S

TT
S
TTS
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   2930.........40.........50.........60.........70.........80........ .90.........100......
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  QEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRK
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Template Sequence  TAYFLLSLYAQGFVPV. . EVRYDRILPMVAQGEVEAGLIIHESRF. TYPRYGLVQVVDLGAWWEERTGLPLPLGAILARR
Template Known Secondary structure 
SS
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GGGTTSSS
TT.GGGGT
SS
G
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   107..110.........120.. .......130.........140......... 150.........160.........170.........180...
 
   224 .....230.........240.. .......250...
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Query Sequence  D. DAELTAAFNKALGELRQD. . . . . GTYDKMAKKYF
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Template Sequence  DLGEGLIRALDEAVRRSVAYALAHPEEALDYMRAHA
Template Known Secondary structure  GG
SGGGG
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   184.....190.........200.........210.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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