Job Description P09551 Confidence 100.00% Date Thu Jan 5 11:02:25 GMT 2012 Rank 22 Aligned Residues 227 % Identity 13% Template d2a5sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.												.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	P	E	T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	G	D	F	V	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	D	.	.	.	.	.	.	.	.	.	.	.	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	T	V	P	C	R	K	F	V	K	I	N	N	S	T	N	E	G	M	N	V	K	K	C	C	K	G	F	C	I	D	I	L	K	K	L	S	R	T	V	K	F	T	Y	D	L	Y	L	V	T	N	G	K	H	G	K	K	V	N	N	V	W	N	G	M	I	G	E	V	V	Y	Q	R	A	V	M	A	V	G
Template Known Secondary structure		T	T										S	S	S	S	S	S											S														T										S	S	S	S					T	T											T	T	S		S				S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																									.	.
Query SS confidence																																											.	.	.	.	.	.																									.	.
Query Sequence		S	L	S	I	T	D	K	R	Q	Q	E	I	A	F	S	D	K	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	D	S	L	K	.	.	.	.	.	.	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	E	T	W	R	S	K	G	.	.	V	D	V	V	A	Y	A
Query Conservation																																											.	.	.	.	.	.																									.	.
Alig confidence																																											.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		S	L	T	I	N	E	E	R	S	E	V	V	D	F	S	V	P	F	V	E	T	G	I	S	V	M	V	S	R	Q	V	T	G	L	S	D	K	K	F	Q	R	P	H	D	Y	S	P	P	F	R	F	G	T	V	P	N	G	S	T	E	R	N	I	R	N	N	Y	P	Y	M	H	Q	Y	M	T	R	F	N	Q	R
Template Known Secondary structure		S		B							T	T																						S	T	T	S					S	G	G	G	S	S	S								T	T	S								T	T									G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	D	L	V	Y	S	D	L	A	A	G	R	L	D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	D	F	A	F	A	G	S	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	A	E	L	T	A	A	F	N	K	A	L	G	E	L	R	Q	D	G
Query Conservation
Alig confidence																																									.	.	.	.																					.
Template Conservation																																									.	.	.	.																					.
Template Sequence		G	V	E	D	A	L	V	S	L	K	T	G	K	L	D	A	F	I	Y	D	A	A	V	L	N	Y	K	A	G	R	D	E	G	C	K	L	V	T	I	.	.	.	.	G	S	G	Y	I	F	A	T	T	G	Y	G	I	A	L	Q	K	G	S	P	.	W	K	R	Q	I	D	L	A	L	L	Q	F	V	G	D	G
Template Known Secondary structure		S										T	T	S		S															T		T	T	S						.	.	.	.					G	G	G										T	T		T	.	T															T
Template Predicted Secondary structure																																									.	.	.	.																					.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		244	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	D	K	M	A	K	K	Y	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	E	E	L	E	T	L	W	L	T
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions