Job Description P09551 Confidence 99.97% Date Thu Jan 5 11:02:25 GMT 2012 Rank 26 Aligned Residues 236 % Identity 17% Template d1xt8a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S	Y	A	A	L	P	E	T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	G	D	F	V	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	D	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S	S	L	S	I	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	D	K	I	K	Q	N	G	V	V	R	I	G	V	F	G	D	K	P	P	F	G	Y	V	D	E	K	G	N	N	Q	G	Y	D	I	A	L	A	K	R	I	A	K	E	L	F	G	D	E	N	K	V	Q	F	V	L	V	E	A	A	N	R	V	E	F	L	K	S	N	K	V	D	I	I	L	A	N	F	T
Template Known Secondary structure										S	S							S			T	T	T					T	T	S				S															S		T	T									G	G	G							T	T	S		S				S	S		B
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	Q	E	I	A	F	S	D	K	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	D	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	E	T	W	R	S	K	G	V	D	V	V	A	Y	A	N	Q	D	L	V	Y	S	D	L	A	A	G	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	P	Q	R	A	E	Q	V	D	F	C	S	P	Y	M	K	V	A	L	G	V	A	V	P	K	D	S	N	I	T	S	V	E	D	L	K	D	K	T	L	L	L	N	K	G	T	T	A	D	A	Y	F	T	Q	N	Y	P	N	I	K	T	L	K	Y	D	Q	N	T	E	T	F	A	A	L	M	D	K	R	G
Template Known Secondary structure								T	T																		T	T					S	S	G	G	G	T	T	S						T	T	S											T	T	S						S	S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	D	F	A	F	A	G	S	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	A	E	L	T	A	A	F	N	K	A	L	G	E	L	R	Q	D	G	T	Y	D	K	M	A	K	K	Y	F	D	F	N	V
Query Conservation
Alig confidence																										.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		D	A	L	S	H	D	N	T	L	L	F	A	W	V	K	D	H	P	D	F	K	M	G	I	.	.	.	.	.	.	.	K	E	L	G	N	K	D	V	I	A	P	A	V	K	K	G	D	K	E	L	K	E	F	I	D	N	L	I	I	K	L	G	Q	E	Q	F	F	H	K	A	Y	D	E	T	L	K	A	H	F
Template Known Secondary structure		S																	T	T						.	.	.	.	.	.	.															T	T																	T	T	T										T	G	G	G	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		258	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	D
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions