Job Description P09551 Confidence 99.96% Date Thu Jan 5 11:02:25 GMT 2012 Rank 32 Aligned Residues 222 % Identity 18% Template d1s50a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.65

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.														.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	E	T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	G	D	.	.	.	.	.	.	.	F	V	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	L	I	P	S	L	K	A
Query Conservation																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.														.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		S	N	R	S	L	I	V	T	T	I	.	L	E	E	P	Y	V	L	F	K	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	I	D	L	L	R	E	L	S	T	I	L	G	F	T	Y	E	I	R	L	V	E	D	G	K	Y	G	A	Q	D	D	V	N	G	Q	W	N	G	M	V	R	E	L	I	D
Template Known Secondary structure												.		B	T	T	T	B						S	S				G	G	G	G			S														T									T	T						B		T	T	T			B									T
Template Predicted Secondary structure												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	D	A	I	I	S	S	L	S	I	T	D	K	R	Q	Q	E	I	A	F	S	D	K	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	D	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	E	T	W	R	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	A	D	L	A	V	A	P	L	A	I	T	Y	V	R	E	K	V	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	E	D	G	A	T	M	T	F	F	K	K	S	K	I	S	T	Y	D	K	M	W	A	F	M
Template Known Secondary structure		T	S		S				S	S		B							T	T					S		S															S						T		S	S	S					B	T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	G	V	D	V	V	A	Y	A	N	Q	D	L	V	Y	S	D	L	A	A	G	R	L	D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	D	F	A	F	A	G	S	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	A	E	L	T	A	A	F	N
Query Conservation
Alig confidence																									.																								.	.	.	.	.	.	.	.																			.
Template Conservation																									.																								.	.	.	.	.	.	.	.																			.
Template Sequence		S	S	R	R	Q	S	V	L	V	K	S	N	E	E	G	I	Q	R	V	L	T	S	D	.	Y	A	F	L	M	E	S	T	T	I	E	F	V	T	Q	R	N	C	N	L	T	Q	I	.	.	.	.	.	.	.	.	G	G	L	I	D	S	K	G	Y	G	V	G	T	P	M	G	S	P	.	Y	R	D	K	I	T
Template Known Secondary structure				T					S	B	S	S											S	S	.															T	T		T	T					.	.	.	.	.	.	.	.	S	S		S	S										T	T		T	.
Template Predicted Secondary structure																									.																								.	.	.	.	.	.	.	.																			.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	G	E	L	R	Q	D	G	T	Y	D	K	M	A	K	K	Y	F	D	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	I	L	Q	L	Q	E	E	G	K	L	H	M	M	K	E	K	W	W	R	G	N
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions