Job Description P09551 Confidence 100.00% Date Thu Jan 5 11:02:25 GMT 2012 Rank 4 Aligned Residues 228 % Identity 25% Template c3g41A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding PDBTitle: the structure of cpn0482, the arginine binding protein from the2 periplasm of chlamydia pneumoniae Resolution 2.10 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	G	D	F	V	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	D	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S	S	L	S	I	T	D	K	R	Q	Q	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	R	I	W	I	V	G	T	N	A	T	Y	P	P	F	E	Y	V	D	A	Q	G	E	V	V	G	F	D	I	D	L	A	K	A	I	S	E	K	L	G	K	Q	L	E	V	R	E	F	A	F	D	A	L	I	L	N	L	K	K	H	R	I	D	A	I	L	A	G	M	S	I	T	P	S	R	Q	K	E	I
Template Known Secondary structure												S		B	T	T	T	B				T	T	S				S														T										G	G	G							T	T	S	S	S				S			B							T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	S	D	K	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	D	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	E	T	W	R	S	K	G	V	D	V	V	A	Y	A	N	Q	D	L	V	Y	S	D	L	A	A	G	R	L	D	A	A	L	Q	D
Query Conservation
Alig confidence																																														.	.
Template Conservation																																														.	.
Template Sequence		A	L	L	P	Y	Y	G	D	E	V	Q	E	L	M	V	V	S	K	R	S	L	E	T	P	V	L	P	L	T	Q	Y	S	S	V	A	V	Q	T	G	T	Y	Q	E	H	.	.	Y	L	L	S	Q	P	G	I	C	V	R	S	F	D	S	T	L	E	V	I	M	E	V	R	Y	G	K	S	P	V	A	V	L	E
Template Known Secondary structure											B									T	T			S		S			G	G	G	S	S						T	T	S					.	.				T	S	T	T							S											T	T	S	S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	D	F	A	F	A	G	S	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	A	E	L	T	A	A	F	N	K	A	L	G	E	L	R	Q	D	G	T	Y	D	K	M	A	K	K	Y	F	D	F	N	V
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		P	S	V	G	R	V	V	L	K	D	F	P	N	L	V	A	T	R	L	.	.	.	.	E	L	P	P	E	C	W	V	L	G	C	G	L	G	V	A	K	D	R	P	E	E	I	Q	T	I	Q	Q	A	I	T	D	L	K	S	E	G	V	I	Q	S	L	T	K	K	W	Q	L	S	E	V
Template Known Secondary structure									G	G	G		T	T							.	.	.	.				G	G	G		B									T	T																		T	T									T	T				T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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