Job Description P09551 Confidence 87.22% Date Thu Jan 5 11:02:25 GMT 2012 Rank 70 Aligned Residues 184 % Identity 12% Template c3fxbB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of the ectoine-binding protein ueha Resolution 2.90 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	.	.	.	.	S	D	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S	S	L	S	I	T	D	K	R	Q	Q	E	I	A	F	S	D	K	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	K	E	E	I	E	A	N	S	D	H	E	I	Q	L	F	P	Y	G	T	L	G	E	S	A	D	I	M	E	Q	T	Q	D	G	I	L	Q	F	V	D	Q	S	P	G	F	T	G	S	L	I	P	E	A	Q	V	F	F	V	P	Y	L	L	P	T	D	Q	D	H	L	A	R	F	F	K	E	S	K	A	I
Template Known Secondary structure										S	S	S								T	T	S	S		S											T	S		S										T	T	T	S	G	G	G	G	G	G	G	S	T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																			111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	D	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	E	T	W	R	S	K	G	V	D	V	V	A	Y	A	N	Q	D	L	V	Y	S	D	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		N	D	M	F	K	P	L	Y	A	D	Q	G	L	E	L	L	N	M	F	P	E	G	E	V	A	M	T	T	K	T	P	V	T	T	C	S	D	L	D	E	V	K	F	R	V	M	T	N	P	L	L	V	E	S	Y	K	A	F	G	A	T	P	.	.	.	.	.	T	P	L	P	W	G	E	V	Y	G	G	L	Q
Template Known Secondary structure			T	T	S						T	T	T																	S	S			S	S	G	G	G	S	T	T							S												T	S			.	.	.	.	.					G	G	G
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		A	G	R	L	D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	D	F	A	F	A	G	S	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	.	.	.	.	.	D	A	E	L	T	A	A	F	N	K	A	L	G	E	L	R	Q	D	G	T	Y	D	K	M
Query Conservation																																																					.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																													.	.	.	.	.																			.
Template Conservation																	.	.	.	.	.	.	.	.																																																				.
Template Sequence		T	N	V	I	Q	G	Q	E	N	P	T	F	F	L	Y	.	.	.	.	.	.	.	.	S	T	K	I	Y	E	V	T	D	Y	I	T	Y	A	G	H	N	N	F	T	T	A	V	M	A	N	K	D	F	Y	D	G	L	S	A	E	D	Q	Q	L	V	Q	N	A	A	L	A	A	Y	D	H	.	T	V	V	Y	Q
Template Known Secondary structure		T	T	S													.	.	.	.	.	.	.	.		T	T	G	G	G	S																										S																			.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																																																				.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.
		249	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		247	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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