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Job DescriptionP09551
Confidence97.92%DateThu Jan 5 11:02:25 GMT 2012
Rank45Aligned Residues215
% Identity13%Templatec2x7pA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:possible thiamine biosynthesis enzyme; PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
Resolution2.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.... .....40.........50.........60.........70... ......80.........90.........100.
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Query Sequence  ETVRIGTDT. . TYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVASD. . FDALIPSLKAKKIDAIISSLSITDKRQQ
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Template Sequence  PTLKVAYIPEHFSTPLFFAQQQG. . . . . . . . . . . . YYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIA
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B


SGGGTT............TT

B


TT
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   2.......10.........20.... .....30.........40.........50.........60.........
 
   102 .......110.........120.........130.........140....... ..150.........160.........170..
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Query Sequence  E. . . . IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAY. . . . . ANETWRSKGVDVVAYANQDLVYSDL
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Template Sequence  KGNENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVXSFVLAHQLGVPSFDQFQVLSNFKNLRDSV
Template Known Secondary structure  TT
TT
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TT
TT

SSTT

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SS
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   173......180.........190.........200.........210.........220.... ... ..230.........240....
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Query Sequence  AAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKD. . . . DAE. . . . LTAAFNKALGELRQDGT
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Template Sequence  NLKDGVEGSDAFXWEYFTSKKYYDNHEIKQIDQIYTPWS. . . . SWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVD
Template Known Secondary structure  TT
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   150.........160.........170.........180........ .190.........200.........210.........220.....
 
   245 ....250......
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Query Sequence  Y. DKMAKKYFDFN
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Template Sequence  EAIEYISSNLDYS
Template Known Secondary structure  SS

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   226...230........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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