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Job DescriptionP09551
Confidence94.69%DateThu Jan 5 11:02:25 GMT 2012
Rank63Aligned Residues188
% Identity11%Templatec2de4B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b; PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.. .......80.........90.........100..... ....110.........120...
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Query Sequence  FVGFDIDLGNEMCKRMQVKCTWVAS. DFDALIPSLKAKKIDAIISSLSITDKRQQEIAF. . . SDKLYAADSRLIAAKGSP
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Template Sequence  PNALLTASESGFLDAAGIELDVLSGQQGTVHFTYDQPAYTRFGGEIPPLLSEGLRAPGRTRLLGITPLLGRQGFFVRDDS
Template Known Secondary structure 

TTTT
BGGGTT

STT
STT
TTS

S
TT
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   30.........40.........50.........60.........70.........80.........90.........100.........
 
   124.....130........ .140.........150.........160...
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Query Sequence  IQPTLDSLKGKHVGV. . . . . . . . . . . . . . . . . . . . . . . . . . LQGSTQEAYANETWRSKGVDVVAYA. . . . . . . . . . . . . .
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Template Sequence  PITAAADLAGRRIGVSASAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGELGVDDVELVPISSPGVDVPAE
Template Known Secondary structure  S

SGGGGTT

T

TTGGGS
TTTTT

GGGS


TTTS

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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   164.....170.........180.........190.........200.........210.........220....
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Query Sequence  . . . . . . . . . . . . . . . . NQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKD. . .
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Template Sequence  QLEESATVKGADLFPDVARGQAAVLASGDVDALYSWLPWAGELQATGARPV. . . . . . VDLGLDERNAYASVWTVSSGLVR
Template Known Secondary structure  SSBSSSTTTS
STTT
S......S
GGGSGGG
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   190.........200.........210.........220.........230.........240 .........250.........260...
 
   225....230.........240.
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Query Sequence  . DAELTAAFNKALGELRQ
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Template Sequence  QRPGLVQRLVDAAVDAGL
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   264.....270.........280.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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