 |
Job Description | P0ACA3 | Confidence | 98.37% | Date | Thu Jan 5 11:17:44 GMT 2012 |
Rank | 192 | Aligned Residues | 77 |
% Identity | 22% | Template | c3nznA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glutaredoxin; |
PDBTitle: the crystal structure of the glutaredoxin from methanosarcina mazei2 go1
|
Resolution | 1.10 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
. | . | . | |
|
70 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . |  |  |  | . | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
V | A | A | N | K | R | S | V | M | T | L | F | S | G | P | T | D | I | Y | S | H | Q | V | R | I | V | L | A | E | K | G | V | S | F | E | I | E | H | V | E | K | D | N | P | P | Q | . |
. |
. |
. |
. |
. |
D | L | I | D | L | N | P | N | Q | S | V | P | T | L | V | D | R | E | . |
L | T | L | . |
. |
W | E | S | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |   | . | . |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |
Template Sequence |   |
V | S | G | V | D | R | G | K | V | I | M | Y | G | L | S | T | C | V | W | C | K | K | T | K | K | L | L | T | D | L | G | V | D | F | D | Y | V | Y | V | D | R | L | E | G | K | E | E | E | E | A | V | E | E | V | R | R | F | N | P | S | V | S | F | P | T | T | I | I | N | D | E | K | A | I | V | G | F | K | E | K |
Template Known Secondary structure |   |
| S | S | B |
|
| S |
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | B |
|  |  |  |  |  | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
| S |
|  |  |  |  | T | T | T |  |  |  |  | S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
74 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
I | I | M | E | Y | L |
Query Conservation |   |
  |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
Template Sequence |   |
E | I | R | E | S | L |
Template Known Secondary structure |   |
 |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|