Job Description P0ACA3 Confidence 99.97% Date Thu Jan 5 11:17:44 GMT 2012 Rank 54 Aligned Residues 195 % Identity 19% Template c2r4vA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:chloride intracellular channel protein 2; PDBTitle: structure of human clic2, crystal form a Resolution 1.85 Å

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		7	.	.	10	.	.	.	.	.	.	.	.									.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		K	R	S	V	M	T	L	F	S	G	P	T	.	.	.	.	.	.	.	.	D	I	Y	S	H	Q	V	R	I	V	L	A	E	K	G	V	S	F	E	I	E	H	V	E	K	D	N	P	P	Q	D	L	I	D	L	N	P	N	Q	S	V	P	T	L	V	D	R	E	L	T	L	W	E	S	R	I	I	M	E	Y
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	P	E	I	E	L	F	V	K	A	G	S	D	G	E	S	I	G	N	C	P	F	C	Q	R	L	F	M	I	L	W	L	K	G	V	K	F	N	V	T	T	V	D	.	.	.	.	.	.	.	.	.	.	M	T	P	G	T	N	P	P	F	L	V	Y	N	K	E	L	K	T	D	F	I	K	I	E	E	F
Template Known Secondary structure												B		T	T	S	S	S	B		S															T										.	.	.	.	.	.	.	.	.	.					S	S	S						T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.															.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	E	R	F	P	H	P	P	L	M	P	V	Y	P	V	A	R	G	E	S	R	L	Y	M	H	R	I	E	K	D	W	Y	T	L	M	N	T	I	I	N	G	S	A	S	E	A	D	A	A	R	K	Q	L	R	E	E	L	L	A	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	Q	T	L	A	P	P	R	Y	P	H	L	S	P	K	Y	K	E	S	F	D	V	G	C	N	L	F	A	K	F	S	A	Y	I	K	N	T	Q	K	E	A	N	K	N	F	E	K	S	L	L	K	E	F	K	R	L	D	D	Y	L	N	T	P	L	L	D	E	I	D	P	D	S	A	E	E	P	P	V	S
Template Known Secondary structure						S		T	T	T	S						S	S	T					T	T	T	T														G	G	G																					S			T	T				T	T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		Q	K	P	Y	F	L	S	D	E	F	S	L	V	D	C	Y	L	A	P	L	L	W	R	L	P	Q	L	.	.	.	.	.	G	I	E	F	S	G	P	G	A	K	E	L	K	G	Y	M	T	R	V	F	E	R	D	S	F	L	A	S	L	T	E	A	E	R	E	M	R	L	G	R	S
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.					.
Template Conservation																																						.
Template Sequence		R	R	L	F	L	D	G	D	Q	L	T	L	A	D	C	S	L	L	P	K	L	N	I	I	K	V	A	A	K	K	Y	R	D	F	D	I	.	P	A	E	F	S	G	V	W	R	Y	L	H	N	A	Y	A	R	E	E	F	T	H	T	C	P	E	D	K	E	I	E	N	T	Y	A	N
Template Known Secondary structure				S	S	S	S	S	S	S																												.		T	T													T						T	T	S											T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions