Job Description P0ACA3 Confidence 99.97% Date Thu Jan 5 11:17:44 GMT 2012 Rank 56 Aligned Residues 189 % Identity 15% Template c1b8xA_ PDB info PDB header:signal protein Chain: A: PDB Molecule:protein (aml-1b); PDBTitle: glutathione s-transferase fused with the nuclear matrix targeting2 signal of the transcription factor aml-1 Resolution 2.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		T	L	F	S	G	P	T	D	I	Y	S	H	Q	V	R	I	V	L	A	E	K	G	V	S	F	E	I	E	H	V	E	K	D	N	P	P	Q	D	L	I	D	L	N	.	.	.	.	P	N	Q	S	V	P	T	L	V	D	R	E	L	T	L	W	E	S	R	I	I	M	E	Y	L	D	E	R	F	P	H	P	P
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		I	L	G	Y	W	K	I	K	G	L	V	Q	P	T	R	L	L	L	E	Y	L	E	E	K	Y	E	E	H	L	Y	E	R	D	E	G	D	K	W	R	N	K	K	F	E	L	G	L	E	F	P	N	L	P	Y	Y	I	D	G	D	V	K	L	T	Q	S	M	A	I	I	R	Y	I	A	D	K	H	N	.	.	.
Template Known Secondary structure							S	S	S	T	T	T										T	T										S	S	T	T	T	T	T	T	S	S	T	T	T	T			S	S			S	S	B				S	S					S												T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		L	M	P	V	Y	P	V	A	R	G	E	S	R	L	Y	M	H	R	I	E	K	D	W	Y	T	L	M	N	T	I	I	N	G	S	A	S	E	A	.	D	A	A	R	K	Q	L	R	E	E	L	L	A	I	A	P	V	F	G	Q	K	P	Y	F	L	S	D	E	F	S	L	V	D	C	Y	L	A	P	L	L	W
Query Conservation																																								.
Alig confidence																																								.
Template Conservation
Template Sequence		M	L	G	G	C	P	K	E	R	A	E	I	S	M	L	E	G	A	V	L	D	I	R	Y	G	V	S	R	I	A	Y	S	K	D	F	E	T	L	K	V	D	F	L	S	K	L	P	E	M	L	K	M	F	E	D	R	L	C	H	K	T	Y	L	N	G	D	H	V	T	H	P	D	F	M	L	Y	D	A	L	D
Template Known Secondary structure			S		S	S																									S	S	S	T	T									T	T	T										G	G	G	T	T		S	B	T	T	B	T	S			T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	Q	L	G	I	E	F	S	G	P	G	A	K	E	L	K	G	Y	M	T	R	V	F	E	R	D	S	F	L	A	S	L	T	E	A	E
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		V	V	L	Y	M	D	P	M	C	.	L	D	A	F	P	K	L	V	C	F	K	K	R	I	E	A	I	P	Q	I	D	K	Y	L	K	S	S	K
Template Known Secondary structure								T	T	T	.	T	T	T		T	T										T	S					T	T	T	T	S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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