 |
Job Description | P08368 | Confidence | 99.78% | Date | Thu Jan 5 11:01:13 GMT 2012 |
Rank | 88 | Aligned Residues | 119 |
% Identity | 22% | Template | d2r25b1 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 1.70 |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
T | V | W | L | V | E | D | E | Q | G | I | A | D | T | L | V | Y | M | L | Q | Q | E | G | F | A | . |
V | E | V | F | E | R | G | L | P | V | L | D | K | A | R | K | . |
. |
. |
. |
. |
Q | V | P | D | V | M | I | L | D | V | G | L | P | D | I | S | G | F | E | L | C | R | Q | L | L | . |
A | L | H | P | A | L | P |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   | . |
|   |   |
|   |   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
| . |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
K | I | L | V | V | E | D | N | H | V | N | Q | E | V | I | K | R | M | L | N | L | E | G | I | E | N | I | E | L | A | C | D | G | Q | E | A | F | D | K | V | K | E | L | T | S | K | G | E | N | Y | N | M | I | F | M | D | V | Q | M | P | K | V | D | G | L | L | S | T | K | M | I | R | R | D | L | G | Y | T | S | P |
Template Known Secondary structure |   |
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| S |  |  |  |  |
| S |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1089 | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | F | L | T | A | R | S | E | E | V | D | R | L | L | G | L | E | I | G | A | D | D | Y | V | A | K | P | F | S | P | R | E | V | C | A | R | V | R | T | L | L | R | R | V | K |
Query Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
I | V | A | L | T | A | F | A | D | D | S | N | I | K | E | C | L | E | S | G | M | N | G | F | L | S | K | P | I | K | R | P | K | L | K | T | I | L | T | E | F | C | A | A | Y | Q |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| . |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1169 | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|