Return to main results Retrieve Phyre Job Id

Job DescriptionP08368
Confidence27.37%DateThu Jan 5 11:01:13 GMT 2012
Rank442Aligned Residues48
% Identity21%Templated2bv6a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190.........200.....
Predicted Secondary structure 
























Query SS confidence 






















































Query Sequence  TPLALTRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAK
Query Conservation      

  
  

  
        

  
   
          

   
 


 
Alig confidence 





















..








.....
















Template Conservation      

  
  

  
      ..
  


  
.....      

  
  
   
Template Sequence  KKYNLTYPQFLVLTILWDESPV. . NVKKVVTEL. . . . . ALDTGTVSPLLKRXEQV
Template Known Secondary structure  T

SS..T.....T

TTTT
Template Predicted Secondary structure 






..
.....


Template SS confidence 






















































   32.......40.........50... ......60.. .......70.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions