Job Description P08368 Confidence 79.02% Date Thu Jan 5 11:01:13 GMT 2012 Rank 196 Aligned Residues 47 % Identity 15% Template d1or7a1 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.00

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	R	Y	E	F	L	L	L	K	T	L	L	K	S	P	G	R	V	W	S	R	Q	Q	L	M	D	S	V	W	E	D	A	Q	D	T	Y	D	R	T	V	D	T	H	I	K	T	L	R	A	K	L	R	A
Query Conservation
Alig confidence																	.	.	.													.	.	.	.	.
Template Conservation																	.	.	.													.	.	.	.	.
Template Sequence		S	L	P	E	D	L	R	M	A	I	T	L	R	E	L	.	.	.	D	G	L	S	Y	E	E	I	A	A	I	M	.	.	.	.	.	D	C	P	V	G	T	V	R	S	R	I	F	R	A	R	E	A	I	D	N
Template Known Secondary structure			S													T	.	.	.	T											T	.	.	.	.	.	T	S
Template Predicted Secondary structure																	.	.	.													.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions