Return to main results Retrieve Phyre Job Id

Job DescriptionP08368
Confidence69.62%DateThu Jan 5 11:01:13 GMT 2012
Rank228Aligned Residues61
% Identity10%Templated1o57a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain N-terminal domain of Bacillus PurR
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.........210.........220...
Predicted Secondary structure 





























Query SS confidence 



































































Query Sequence  TRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMG
Query Conservation 
  
  

  
        

  
   
          

   
 


 

         
 



 
Alig confidence 



























.....























..








Template Conservation   



 

  
   
  

 
  
   
.....  








 


        
.. 


  


Template Sequence  SGRLVDLTNYLLTHPHELIPLTFFSERY. . . . . ESAKSSISEDLTIIKQTFEQQGIG. . TLLTVPGAA
Template Known Secondary structure  TSTT

B
T.....T

TTS..
STT
Template Predicted Secondary structure 



.....


..




Template SS confidence 



































































   6...10.........20.........30... ......40.........50....... ..60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions