Job Description P08368 Confidence 53.82% Date Thu Jan 5 11:01:13 GMT 2012 Rank 284 Aligned Residues 100 % Identity 15% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		2	.	.	.	.	.	.	.						10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	E	T	V	W	L	V	.	.	.	.	.	E	D	E	Q	G	I	A	D	T	L	V	Y	M	L	Q	Q	E	G	F	A	V	E	V	F	E	.	.	.	.	.	.	.	.	.	.	.	R	G	L	P	V	L	D	K	A	R	K	Q	V	P	D	V	M	I	L	D	V	G	L	P	D	I	S	G	F	E	L
Query Conservation										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	Q	G	A	F	V	P	F	V	T	I	G	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	.	.	.	.	.	.	.	.	.	P	D	I	C	F	E	L
Template Known Secondary structure			T	B									T	T	S	S															T	T		S	S										T	T																T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.										.	.	80	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		C	R	Q	L	L	A	L	H	P	A	L	P	V	L	F	L	T	A	R	S	E	.	.	.	.	.	.	E	V	D	R	L	L	G	L	E	I	G	A	D	D	Y	V	A	K	P	F	S	P	R	E
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	P	T	N	E
Template Known Secondary structure										T	T	S													T	T													T							T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions