Job Description P08368 Confidence 94.33% Date Thu Jan 5 11:01:13 GMT 2012 Rank 160 Aligned Residues 53 % Identity 19% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		L	L	L	K	T	L	L	K	S	P	G	R	V	W	S	R	Q	Q	L	M	D	S	V	W	E	D	A	Q	D	T	Y	D	R	T	V	D	T	H	I	K	T	L	R	A	K	L	R	A	I	N	P	D	L	S	P	I	N	T	H	R	G	M	.	.	G	Y	S	L
Query Conservation																																																																.	.
Alig confidence																									.	.	.	.	.						.	.	.	.														.	.	.	.									.	.
Template Conservation																									.	.	.	.	.						.	.	.	.														.	.	.	.
Template Sequence		H	S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	.	H	L	N	P	V	.	.	.	.	X	I	R	N	I	L	S	V	L	H	K	H	G	.	.	.	.	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L
Template Known Secondary structure									T	T	T	T	S		B										.	.	.	.	.	T	S		G	G	.	.	.	.	G	T										T	T	.	.	.	.	S	S					S	T	T
Template Predicted Secondary structure																									.	.	.	.	.						.	.	.	.														.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions