Return to main results Retrieve Phyre Job Id

Job DescriptionP08368
Confidence99.83%DateThu Jan 5 11:01:13 GMT 2012
Rank56Aligned Residues121
% Identity21%Templatec3eulB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20........ .30.........40.........50.........60.........70.........
Predicted Secondary structure 








..































Query SS confidence 


























. .


















































Query Sequence  QRETVWLVEDEQGIADTLVYMLQQEGF. . AVEVFERGLPVLDKARKQVPDVMILDVGLPDISGFELCRQLLALHPALPVL
Query Conservation   
 







      
   
   
 .. 
  
     

        






  
   
      

       

Alig confidence 


























..


















































Template Conservation    







       
   
        
       

   
     



 
  
    
      
        

Template Sequence  EKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVL
Template Known Secondary structure 


S
TSSSS

STT
SSS
TT
S
Template Predicted Secondary structure 





























Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   80.........90.........100.........110.........120..
Predicted Secondary structure 





























Query SS confidence 










































Query Sequence  FLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRV
Query Conservation   

              
      

     
   
       
Alig confidence 










































Template Conservation   

              
    
 

     
   
     

Template Sequence  LISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGR
Template Known Secondary structure  S


TT
STT

TT
Template Predicted Secondary structure 














Template SS confidence 










































   87..90.........100.........110.........120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions