Return to main results Retrieve Phyre Job Id

Job DescriptionP08368
Confidence64.88%DateThu Jan 5 11:01:13 GMT 2012
Rank247Aligned Residues95
% Identity13%Templatec3e18A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30. ........40.........50.........60.........70.........
Predicted Secondary structure 









.































Query SS confidence 






























.















































Query Sequence  MQRETVWLVEDEQGIADTLVYMLQQEGFAVE. VFERGLPVLDKARKQVPDVMILDVGLPDISGFELCRQLLALHPALPVL
Query Conservation 
 
 







      
   
   
  
 . 
     

        






  
   
      

       

Alig confidence 






























.

















...........


















Template Conservation 

 


 


 
  
  
   
       



 
               ...........      


    

 
 
Template Sequence  LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLK. . . . . . . . . . . IYESYEAVLADEKVDAVLI
Template Known Secondary structure 




STSTT
SSTTT

...........B
S

TT

Template Predicted Secondary structure 














...........






Template SS confidence 















































































   1........10.........20.........30.........40.........50 .........60.........
 
   80.........90.........100......
Predicted Secondary structure 


















Query SS confidence 


























Query Sequence  FLTARSEEVDRLLGLEIGADDYVAKPF
Query Conservation   

              
      

 
Alig confidence 


























Template Conservation   

   
      

  



  


 
Template Sequence  ATPNDSHKELAISALEAGKHVVCEKPV
Template Known Secondary structure 
S
GGGTT
SS
Template Predicted Secondary structure 







Template SS confidence 


























   70.........80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions