Job Description P08368 Confidence 27.65% Date Thu Jan 5 11:01:13 GMT 2012 Rank 438 Aligned Residues 80 % Identity 15% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		E	T	V	W	L	V	E	D	E	Q	G	I	A	D	T	L	V	Y	M	L	Q	Q	E	G	F	A	V	E	V	F	E	R	G	L	P	V	L	D	K	A	R	K	Q	V	P	D	V	M	I	L	D	V	G	L	P	D	I	S	G	F	.	.	E	L	C	R	Q	L	L	A	L	H	P	A	L	P	V	L	F	L
Query Conservation																																																														.	.
Alig confidence																																									.	.	.										.	.	.							.	.														.
Template Conservation																																									.	.	.										.	.	.																						.
Template Sequence		F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	F	E	V	A	S	D	R	E	V	S	V	.	.	.	K	G	F	D	T	V	I	V	D	.	.	.	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	K	P	G	V	.	I	V	Y	V
Template Known Secondary structure									S															T	T										T	T	T				.	.	.	T	T		S						.	.	.			T	T		S														S		.
Template Predicted Secondary structure																																									.	.	.										.	.	.																						.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.
		82	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	S	E	E	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	C	N	P	E	T	F	A	R
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions