Job Description P08368 Confidence 97.36% Date Thu Jan 5 11:01:13 GMT 2012 Rank 138 Aligned Residues 47 % Identity 28% Template c2q0oA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable transcriptional activator protein trar; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing Resolution 2.00 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	Y	E	F	L	L	L	K	T	L	L	K	S	P	G	R	V	W	S	R	Q	Q	L	M	D	S	V	W	E	D	A	Q	D	T	Y	D	R	T	V	D	T	H	I	K	T	L	R	A	K	L	R	A	I	N
Query Conservation
Alig confidence															.	.	.	.													.	.	.	.	.
Template Conservation															.	.	.	.													.	.	.	.	.
Template Sequence		L	S	P	R	E	M	L	C	L	V	W	A	S	.	.	.	.	K	G	K	T	A	S	V	T	A	N	L	T	.	.	.	.	.	G	I	N	A	R	T	V	Q	H	Y	L	D	K	A	R	A	K	L	D	A	E	S
Template Known Secondary structure															.	.	.	.	T	T											.	.	.	.	.																			T		S	S
Template Predicted Secondary structure															.	.	.	.													.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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