Job Description P08368 Confidence 84.45% Date Thu Jan 5 11:01:13 GMT 2012 Rank 181 Aligned Residues 67 % Identity 13% Template c2k4bA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: copr repressor structure Resolution UNK

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	T	R	Y	E	F	L	L	L	K	T	L	L	K	S	P	G	R	V	W	S	R	Q	Q	L	M	D	S	V	W	E	D	A	Q	D	T	Y	D	R	T	V	D	T	H	I	K	T	L	R	A	K	L	R	A	I	N	P	D	L	S	P	I	N	T	H	R	G	M	G	Y	S	L	R	G	L
Query Conservation
Alig confidence																					.	.											.																						.	.	.	.	.	.	.
Template Conservation																					.	.											.																						.	.	.	.	.	.	.
Template Sequence		F	N	V	S	N	A	E	L	I	V	M	R	V	I	W	S	L	G	E	.	.	A	R	V	D	E	I	Y	A	Q	I	.	P	Q	E	L	E	W	S	L	A	T	V	K	T	L	L	G	R	L	V	K	K	.	.	.	.	.	.	.	E	M	L	S	T	E	K	E	G	R	K	F	V	Y	R	P	L
Template Known Secondary structure							S		S										S		.	.									T		.		G	G	G																	T	.	.	.	.	.	.	.	T	S							T	T
Template Predicted Secondary structure																					.	.											.																						.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions