Job Description P08368 Confidence 41.68% Date Thu Jan 5 11:01:13 GMT 2012 Rank 337 Aligned Residues 96 % Identity 23% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.			.	.	.
Predicted Secondary structure															.	.	.																							.	.	.	.	.	.	.																						.	.								.	.
Query SS confidence															.	.	.																							.	.	.	.	.	.	.																						.	.								.	.
Query Sequence		M	Q	R	E	T	V	W	L	V	E	D	E	Q	.	.	.	G	I	A	D	T	L	V	Y	M	L	Q	Q	E	G	F	A	V	E	V	F	E	R	.	.	.	.	.	.	.	G	L	P	V	L	D	K	A	R	K	Q	V	P	D	V	M	I	L	D	V	G	.	.	L	P	D	I	S	G	F	.	.	E	L	C
Query Conservation															.	.	.																							.	.	.	.	.	.	.																						.	.								.	.
Alig confidence															.	.	.																							.	.	.	.	.	.	.																						.	.								.	.
Template Conservation
Template Sequence		G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P	L	M	G	E	L	A
Template Known Secondary structure		T	T	T											S	S	T	T													T								T	T																	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	L	A	L	H	P	A	L	P	V	L	F	L	T	A	R	S	E	E	V	D	R	L	L	G	L	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	Q	E	A	L	S	V	A	R	A	F
Template Known Secondary structure										S								T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions