Job Description P08368 Confidence 75.64% Date Thu Jan 5 11:01:13 GMT 2012 Rank 210 Aligned Residues 51 % Identity 8% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

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Predicted Secondary structure													.	.	.	.					.	.	.	.
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Query Sequence		M	Q	R	E	T	V	W	L	V	E	D	.	.	.	.	E	Q	G	I	.	.	.	.	A	D	T	L	V	Y	M	L	Q	Q	E	G	F	A	V	E	V	F	E	R	G	L	P	V	L	D	K	A	R	K	Q	V	P	D	V	M	I
Query Conservation													.	.	.	.					.	.	.	.
Alig confidence					.								.	.	.	.					.	.	.	.
Template Conservation					.
Template Sequence		M	T	D	.	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F
Template Known Secondary structure				S	.									S	S	T	T																		T	T								T	T	T	S		G	G	G	S	G	G	G	T
Template Predicted Secondary structure					.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions