Job Description P08368 Confidence 72.29% Date Thu Jan 5 11:01:13 GMT 2012 Rank 219 Aligned Residues 47 % Identity 15% Template c1rp3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia); PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma2 complex, sigma-28/flgm Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	R	Y	E	F	L	L	L	K	T	L	L	K	S	P	G	R	V	W	S	R	Q	Q	L	M	D	S	V	W	E	D	A	Q	D	T	Y	D	R	T	V	D	T	H	I	K	T	L	R	A	K	L	R	A
Query Conservation
Alig confidence																.	.	.														.	.	.	.	.
Template Conservation																.	.	.														.	.	.	.	.
Template Sequence		K	L	P	E	R	E	K	L	V	I	Q	L	I	F	.	.	.	Y	E	E	L	P	A	K	E	V	A	K	I	L	.	.	.	.	.	E	T	S	V	S	R	V	S	Q	L	K	A	K	A	L	E	R	L	R	E
Template Known Secondary structure		T	S													.	.	.	T	S												.	.	.	.	.	T	S
Template Predicted Secondary structure																.	.	.														.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions