Job Description P08368 Confidence 77.11% Date Thu Jan 5 11:01:13 GMT 2012 Rank 205 Aligned Residues 80 % Identity 18% Template c1r8jB_ PDB info PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus Resolution 2.03 Å

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		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure						.																																												.	.
Query SS confidence						.																																												.	.
Query Sequence		M	Q	R	E	.	T	V	W	L	V	E	D	E	Q	G	I	A	D	T	L	V	Y	M	L	Q	Q	E	G	F	A	V	E	V	F	E	R	G	L	P	V	L	D	K	A	R	K	Q	V	.	.	P	D	V	M	I	L	D	V	G	L	P	D	I	S	G	F	E	L	C	R	Q	L	L	A	L	H	P	A	L	P
Query Conservation						.																																												.	.
Alig confidence						.																																												.	.														.	.
Template Conservation																																																																	.	.
Template Sequence		V	L	S	Q	I	A	I	C	I	W	V	E	S	T	A	I	L	Q	D	C	Q	R	A	L	S	A	D	R	Y	Q	L	Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	N	P	S	F	.	.	R	A	V	V	Q	Q	L	C	F	E	G	V	V	V	P
Template Known Secondary structure																									T		S	T	T								S											S	T	T	S		S						T	T	S	T	T		.	.										T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	F	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	V	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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