Job Description P08368 Confidence 23.13% Date Thu Jan 5 11:01:13 GMT 2012 Rank 481 Aligned Residues 96 % Identity 18% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																								.	.	.	.	.	.	.																						.	.
Query SS confidence														.	.	.																								.	.	.	.	.	.	.																						.	.
Query Sequence		M	Q	R	E	T	V	W	L	V	E	D	E	.	.	.	Q	G	I	A	D	T	L	V	Y	M	L	Q	Q	E	G	F	A	V	E	V	F	E	R	.	.	.	.	.	.	.	G	L	P	V	L	D	K	A	R	K	Q	V	P	D	V	M	I	L	D	V	G	.	.	L	P	D	I	S	G	F	E	L	C	R	Q
Query Conservation														.	.	.																								.	.	.	.	.	.	.																						.	.
Alig confidence														.	.	.																								.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		K	K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E
Template Known Secondary structure			T	T											S	S															T							T	T																		T	T		S									S			T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		69	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		L	L	A	L	.	.	.	.	H	P	A	L	P	V	L	F	L	T	A	R	S	E	E	V	D	R	L	L	G	L	E	I
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		M	K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K	F
Template Known Secondary structure												S								G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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