 |
Job Description | P0A7C6 | Confidence | 96.75% | Date | Thu Jan 5 11:05:21 GMT 2012 |
Rank | 37 | Aligned Residues | 79 |
% Identity | 16% | Template | c2w7tA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:putative cytidine triphosphate synthase; |
PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin
|
Resolution | 2.10 Å |
|
 |
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Q | T | W | D | D | Y | T | A | K | T | A | A | V | L | A | P | L | G | V | S | V | T | G | I | H | S | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | D | P | V | A | A | I | E | N | A | E | I | V | I | V | G | G | G | N | T | F | Q | L | L | K | Q | C | R | E | R | G | L | L | A | P | I | T | D | V | V | K | R | G |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
G | D | T | Y | F | S | V | L | Q | C | F | E | H | C | Q | I | A | L | Q | V | R | L | D | I | L | Y | V | D | S | E | E | L | E | G | P | N | A | D | E | A | R | K | A | L | L | G | C | D | G | I | F | V | P | G | G | F | G | N | R | . |
. |
. |
. |
. |
G | V | D | G | K | C | A | A | A | Q | V | A | R | M | N | N |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | G | G | G | G | S | S | T | T | T |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
|
| T | T | T | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
  |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | Y | I | G | W | S | A | G | A | N | L | A | C |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
| . |
|   |
|   |
|   |
Template Sequence |   |
I | P | Y | F | G | V | L | . |
G | M | Q | V | A | V |
Template Known Secondary structure |   |
|
|  |  |  |
|
| . |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
| . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
413 | . | . | . | . | . | . | |
420 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|