Job Description P0A7C6 Confidence 32.22% Date Thu Jan 5 11:05:21 GMT 2012 Rank 200 Aligned Residues 61 % Identity 15% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.							.	.	.	.
Query SS confidence																																																		.	.							.	.	.	.
Query Sequence		S	A	V	F	I	P	F	A	G	V	T	Q	T	W	D	D	Y	T	A	K	T	A	A	V	L	A	P	L	G	V	S	V	T	G	I	H	S	V	V	D	P	V	A	A	I	E	N	A	.	.	E	I	V	I	V	G	.	.	.	.	G	G	N	T	F	Q	L	L	K	Q	C	R	E
Query Conservation																																																		.	.							.	.	.	.
Alig confidence							.	.	.	.	.	.																																						.	.							.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		N	V	L	V	I	.	.	.	.	.	.	E	D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	S	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	N	G	L	E	I	L	K	W	I	K	E
Template Known Secondary structure							.	.	.	.	.	.																		T							S	S											S			S						S	B		S	S	S	B
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.							.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions