Job Description P75728 Confidence 100.00% Date Thu Jan 5 12:13:32 GMT 2012 Rank 21 Aligned Residues 339 % Identity 17% Template d1pn0a1 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain Resolution 1.70

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		T	N	Q	P	T	E	I	A	I	V	G	G	G	M	V	G	G	A	L	A	L	G	L	A	Q	.	.	.	.	.	H	G	F	A	V	T	V	I	E	H	A	E	P	A	P	F	V	A	D	S	Q	P	D	V	R	I	S	A	I	S	A	A	S	V	S	L	L	K	G	L	G	V	W	D	A	V	Q	A	M	R
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		S	E	S	Y	C	D	V	L	I	V	G	A	G	P	A	G	L	M	A	A	R	V	L	S	E	Y	V	R	Q	K	P	D	L	K	V	R	I	I	D	K	R	S	T	K	V	Y	N	G	Q	A	.	.	.	.	.	.	D	G	L	Q	C	R	T	L	E	S	L	K	N	L	G	L	A	D	K	I	L	S	E	A
Template Known Secondary structure														S																	S	T	T								S	S	S	S				S		S		.	.	.	.	.	.													T	T	T							T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		C	H	P	Y	R	R	L	E	T	W	E	W	E	T	A	H	V	V	F	.	.	.	.	.	D	A	A	E	L	K	L	P	L	L	G	Y	M	V	E	N	T	V	L	Q	Q	A	L	W	Q	A	L	E	A	H	P	K	V	T	L	R	V	P	G	S	L	I	A	L	H	R	H	D	D	L	Q	E	L	E	L	K
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		N	D	M	S	T	I	A	L	Y	N	P	D	E	N	G	H	I	R	R	T	D	R	I	P	D	T	L	P	G	I	S	R	Y	H	Q	V	V	L	H	Q	G	R	I	E	R	R	I	L	D	S	I	A	E	I	S	D	T	R	I	K	V	E	R	P	L	I	P	E	K	M	E	I	D	S	S	K	A	E	D	P
Template Known Secondary structure		B												T	T	S										S	S		T	T	S		S	S																							T	T	S	S					S										G	G	G	T	T		T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		G	G	E	V	I	R	A	K	L	.	.	V	I	G	A	D	G	A	N	S	Q	V	R	Q	M	A	G	I	G	V	H	A	W	Q	Y	A	Q	S	C	M	L	I	S	V	Q	C	E	N	D	P	G	D	S	T	W	Q	Q	F	T	P	D	G	P	R	A	F	L	P	L	F	D	N	W	A	S	L	V	W	Y	D
Query Conservation											.	.
Alig confidence											.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	Y	P	V	T	M	T	L	R	Y	M	S	E	D	E	S	T	P	L	Q	F	G	H	K	T	E	N	G	L	F	R	S	N	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	E	E
Template Known Secondary structure		T													G	G	G	S				T	T						S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																																									.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	A	R	I	R	Q	L	Q	N	M	N	M	A	Q	L	Q	A	E	I	A	K	H	F	P	S	R	L	G	Y	V	T	P	L	A	A	G	A	F	P	L	T	R	R	H	A	L	Q	Y	V	Q	P	G	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	Y	R	D	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	A	N	Y	R	L	P	E	G	K	E	A	G	E	I	E	T	V	H	C	K	Y	V	I	G	C	D	G	G	H	S	W	V	R	R	T	L	G	F	E	M	I	V	T	E	K	F	S	K	D	E	R	V	F	I	A	G	D	A	C	H	T	H	S	P	K	A	G	Q	G	M	N	T	S	M	M	D	T	Y
Template Known Secondary structure				T	S				S	T	T			T	T																T	T								T							S		S			T	T	T					G	G	G	T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	D	V	L	V	N	A	R	S	Y	G	E	A	W	A	S	Y	P	V	L	K	R	Y	Q	M	R	R	M	A	D	N	F	I	M	Q	S	G	M	D	L	F	Y	A	G	F	S	N	N	L	P	P	L	R	F	M	R	N	L	G	L	M	A	A	E	R	A	G	V	L	K	R	Q	A	L	K	Y	A	L
Query Conservation
Alig confidence													.	.	.																																									.	.
Template Conservation													.	.	.																																									.	.
Template Sequence		N	L	G	W	K	L	G	L	V	L	T	.	.	.	G	R	A	K	R	D	I	L	K	T	Y	E	E	E	R	Q	P	F	A	Q	A	L	I	D	F	D	H	Q	F	S	R	L	F	S	G	R	P	A	K	D	.	.	V	A	D	E	M	G	V	S	M	D	V	F	K	E	A	F	V	K	G	N	E	F	A	S
Template Known Secondary structure												T	.	.	.	T		S		G	G	G	G																											S		B		S	S	.	.	T	T		T	T	S	B																	T
Template Predicted Secondary structure													.	.	.																																									.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.				390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		454	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions