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Job DescriptionP75728
Confidence99.53%DateThu Jan 5 12:13:32 GMT 2012
Rank43Aligned Residues314
% Identity13%Templatec3dmeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40......
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Query Sequence  QPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVADS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   47..50.........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  . . . . QPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKLPLLGYMVENTVLQQALWQAL
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Template Sequence  VPHQRLGKLIVATSDAEASQLDSI. . ARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDA
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   83......90.........100...... ...110.........120.........130.........140.........150.........160
 
   123......130.........140.........150. ........160.........170 .........180.........190.........
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Query Sequence  EAHPKVTLRVPGSLIALHRHDDLQELELK. . GGEVIRAKLVIGADGANSQ. VRQMAGIGVHAWQYAQSCMLISVQCENDP
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Template Sequence  ESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGR
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   200....... ..210.........220...... ...230.........240.........250.........260.........270...
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Query Sequence  GDSTWQQF. . . . TPDGPRAFLPLFDNWASLV. . WYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRR
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Template Sequence  APFSRLIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKIS
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   274.....280.........290.........300. ........310.........
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Query Sequence  HALQYVQPGLALVGDAAHTIHPLAGQGV. NLGYRDVDALIDVLVNAR
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Template Sequence  GPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARL
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   321........330.........340.........350.........360.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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