Job Description P75728 Confidence 99.28% Date Thu Jan 5 12:13:32 GMT 2012 Rank 80 Aligned Residues 153 % Identity 18% Template c3cp8C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: crystal structure of gida from chlorobium tepidum Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	I	A	I	V	G	G	G	M	V	G	G	A	L	A	L	G	L	A	Q	H	G	F	A	V	T	V	I	E	H	A	E	P	A	P	F	V	A	D	S	Q	P	D	V	R	I	S	A	I	S	A	A	S	V	S	L	L	K	G	L	G	V	W	D	A	V	Q	A	M	R	C	H	P	Y	R	R	L	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	V	I	V	V	G	A	G	H	A	G	C	E	A	A	L	A	V	A	R	G	G	L	H	C	L	L	I	T	S	D	L	S	A	V	A	R	M	S	C	N	P	A	I	G	G	V	A	K	G	Q	I	T	R	E	I	D	A	L	G	G	E	M	G	K	A	I	D	A	T	G	I	Q	F	R	M	L	N	R
Template Known Secondary structure										S													T	T								S		G	G	G	T	T			S	S		S					T	T												T		S																	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	W	E	T	A	H	V	V	F	D	A	A	E	L	K	L	P	L	L	G	Y	M	V	E	N	T	V	L	Q	Q	A	L	W	Q	A	L	E	A	H	P	K	V	T	L	R	V	P	G	S	L	I	A	L	H	R	H	D	D	L	Q	E	L	E	L	K	G	G	E	V	I	R	A	K	L	V	I	G	A	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	G	P	A	M	H	S	P	R	.	.	.	.	.	.	.	.	.	.	.	A	Q	A	D	K	T	Q	Y	S	L	Y	M	R	R	I	V	E	H	E	P	N	I	D	L	L	Q	D	T	V	I	G	V	S	A	N	S	G	K	F	S	S	V	T	V	R	S	G	R	A	I	Q	A	K	A	A	I	L	A	C
Template Known Secondary structure		S	S		T	T	T					.	.	.	.	.	.	.	.	.	.	.																		T		T	T															T	T								T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.												.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		166	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	F	L
Template Known Secondary structure		T	T		B
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions