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Job DescriptionP75728
Confidence99.54%DateThu Jan 5 12:13:32 GMT 2012
Rank42Aligned Residues302
% Identity14%Templatec2gahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:heterotetrameric sarcosine oxidase beta-subunit; PDBTitle: heterotetrameric sarcosine: structure of a diflavin2 metaloenzyme at 1.85 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20........ .30.........40.........50.... .....60.........70..
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Query Sequence  NQPTEIAIVGGGMVGGALALGLAQHG. . FAVTVIEHAEPAPFVADSQPDVRISA. . . . . . . . ISAASVSLLKGLGVWDAV
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Template Sequence  KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNXARNTTIIRSNYLWDESAGIYEKSLKLWEQL. . PEDL
Template Known Secondary structure 
S

S




SSSTT
SGGGTS


B



SS..T
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   1920.........30.........40.........50.........60.........70.........80.........90.. ....
 
   73......80....... ..90.........100.........110....
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Query Sequence  QAMRCHPYRRLETWE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WETAHVVFDAAELKLPLLGYMVENTVL
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Template Sequence  EYDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVXGATWQPRAGIAKHDHV
Template Known Secondary structure  T




B



STTT




TTS

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SSS


TT
BB

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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  QQALWQALEAHPKVTLRVPGSLIALHRHDDLQELELKGGEVIRAKLVIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQ
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Template Sequence  AWAFARKANEXGVDIIQNCEVTGFIKDGEKVTGVKTTRGTIHAGKVALAGAGHSSVLAEXAGFELPIQSHPLQALVSELF
Template Known Secondary structure  TT

S

SSSBTT

GGGT




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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   195....200.........210.........220.........230.........240. ........250.........260.........270..
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Query Sequence  CENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPARIRQLQNMN. . MAQLQAEIAKHFPSRLGYVTPLAAGAFPLTR
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Template Sequence  EPVHPT. . . . VVXSNHIHVYVSQAHKGELVXGAGIDSYNGYGQRGAFHVIQEQXAAAVELFPIFARAHVLRTWGGI. . . .
Template Known Secondary structure  SS


S....TTTT
TTS
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SS


T
GGGTT

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   257..260.. .......270.........280.........290.........300.........310.........320........
 
   273......280......... 290.........300.........310.......
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Query Sequence  RHALQYVQPGLALVGDA. . . . AHTIHPLAGQGVNLGYRDVDALIDVLVN
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Template Sequence  . . . VDTTXDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN
Template Known Secondary structure  ...TTS


SSBT
BTT

STT
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   329330.........340.........350.........360.........370....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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