Job Description P75728 Confidence 99.97% Date Thu Jan 5 12:13:32 GMT 2012 Rank 24 Aligned Residues 299 % Identity 15% Template c2bryA_ PDB info PDB header:transport Chain: A: PDB Molecule:nedd9 interacting protein with calponin homology PDBTitle: crystal structure of the native monooxygenase domain of2 mical at 1.45 a resolution Resolution 1.45 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	T	E	I	A	I	V	G	G	G	M	V	G	G	A	L	A	L	G	L	A	Q	H	G	F	A	V	T	V	I	E	H	A	E	P	A	P	F	V	A	D	S	Q	P	D	V	R	I	S	A	I	S	A	A	S	V	S	L	L	K	G	L	G	V	W	D	A	V	Q	A	M	R	C	H	P	Y	R	R	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		T	N	T	K	C	L	V	V	G	A	G	P	C	G	L	R	A	A	V	E	L	A	L	L	G	A	R	V	V	L	V	E	K	R	I	K	.	.	.	.	.	.	.	.	.	F	S	R	H	N	V	L	H	L	W	P	F	T	I	H	D	L	R	A	L	G	A	K	K	F	Y	G	R	F	C	.	.	.	.	.
Template Known Secondary structure		T	T									S													T	T								S		S	S	.	.	.	.	.	.	.	.	.																			T	T	T						T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		E	T	W	E	W	E	T	A	H	V	V	F	D	A	A	E	L	K	L	P	L	L	G	Y	M	V	E	N	T	V	L	Q	Q	A	L	W	Q	A	L	E	A	H	P	K	V	T	L	R	V	P	G	S	L	I	A	L	H	R	H	D	D	L	Q	E	.	.	.	.	.	.	.	.	L	E	L	K	G	G	E	V
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																					.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	T	L	D	H	I	S	I	R	Q	L	Q	L	L	L	L	K	V	A	L	L	L	G	.	V	E	I	H	W	G	V	K	F	T	G	L	Q	P	P	P	R	K	G	S	G	W	R	A	Q	L	Q	P	N	P	P	A	Q	L	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																				T	T	.						S											S	T	T			B						S								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
																					149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.													.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	K	L	V	I	G	A	D	G	A	N	S	Q	V	R	Q	M	A	G	I	G	V	H	A	W	Q	Y	A	Q	S	C	M	L	I	S	V	Q	C	E	N	D	P	G	D	S	T	W	Q	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	T	P	D	G	P	R	A	F	L	P	L	F	D	N	W	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	F	D	V	L	I	S	A	A	G	G	K	F	V	P	E	G	F	T	I	R	E	M	R	G	K	L	A	I	G	I	T	A	N	F	V	N	G	R	T	V	E	E	T	Q	V	P	E	I	S	G	Y	N	Q	K	F	F	Q	S	L	L	K	A	T	G	I	D	L	E	N	I	V	Y	Y	K	D	E	T	H
Template Known Secondary structure				B	S								T	T				T	T									S																			T	S			B					S	S																					S	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.																	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	V	W	Y	D	S	P	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	Q	L	Q	N	M	N	M	A	Q	L	Q	A	E	I	A	K	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	R	L	G	Y	V	T	P	L	A	A	G	A	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	V	M	T	A	K	K	Q	C	L	L	R	L	G	V	L	R	Q	D	L	S	E	T	D	Q	L	L	G	K	A	N	V	V	P	E	A	L	Q	R	F	A	R	A	A	A	D	F	A	T	H	G	K	L	G	K	L	E	F	A	Q	D	A	R	G	R	P	D	V	A	A	F	D	F	T	S	M	M	R	A
Template Known Secondary structure															T	T	S	B	S	S			S	S					T	S	T	T	T	B																	T	T	T	T	T		S			B		B		T	T	S	S	B								S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	L	T	R	R	H	A	L	Q	Y	V	Q	P	.	G	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	Y	R	D	V	D	A	L	I	D	V	L	V	N	A	R	S	Y	G	E	A	W	A	S	Y	P	V	L	K	R	Y	Q	M	R	R	M
Query Conservation															.
Alig confidence															.																																								.	.	.
Template Conservation																																																							.	.	.
Template Sequence		E	S	S	A	R	V	Q	E	K	H	G	A	R	L	L	L	G	L	V	G	D	C	L	V	E	P	F	W	P	L	G	T	G	V	A	R	G	F	L	A	A	F	D	A	A	W	M	V	K	R	W	A	E	.	.	.	G	A	G	P	L	E	V	L	A	E	R	E	S	L	Y	Q
Template Known Secondary structure		S		S							T	T									G	G	G	T	B				G	G	G																							T	.	.	.	T															T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.				.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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