Job Description P75728 Confidence 99.22% Date Thu Jan 5 12:13:32 GMT 2012 Rank 83 Aligned Residues 305 % Identity 9% Template c2a87A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of m. tuberculosis thioredoxin reductase Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																																																					.	.
Query SS confidence						.																																																					.	.
Query Sequence		T	N	Q	P	.	T	E	I	A	I	V	G	G	G	M	V	G	G	A	L	A	L	G	L	A	Q	H	G	F	A	V	T	V	I	E	H	A	E	P	A	P	F	V	A	D	S	Q	P	D	V	R	I	S	A	I	S	A	.	.	A	S	V	S	L	L	K	G	L	G	V	W	D	A	V	Q	A	M	R	C	H
Query Conservation						.																																																					.	.
Alig confidence						.																																																					.	.
Template Conservation
Template Sequence		A	H	H	P	V	R	D	V	I	V	I	G	S	G	P	A	G	Y	T	A	A	L	Y	A	A	R	A	Q	L	A	P	L	V	F	E	G	T	S	F	G	G	A	L	M	T	T	T	D	V	E	N	Y	P	G	F	R	N	G	I	T	G	P	E	L	M	D	E	M	R	E	Q	A	L	R	F	G	A	D	L	R
Template Known Secondary structure																												T	T									S	S		S		G	G	G	S		S		B			S	T	T		T	T		B																T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	R	R	L	E	T	W	E	W	E	T	A	H	V	V	F	D	A	A	E	L	K	L	P	L	L	G	Y	M	V	E	N	T	V	L	Q	Q	A	L	W	Q	A	L	E	A	H	P	K	V	T	L	R	V	P	G	S	L	I	A	L	H	R	H	D	D	L	Q	E	L	E	L	K	G	G	E	V	I	R	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	D	V	E	S	V	S	L	H	G	P	L	K	S	V	V	T	A	D	G	Q	T	H	R	A	R	A	V	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	A	A	A	R	Y	L	Q	V	P	G	E	Q	E	L	L	G	R	G	V	S	S	C	A	T	C	D	G	F	F	F
Template Known Secondary structure											S	S	S	S						T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T					T	B	T	T	T			S						G	G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		K	L	V	I	G	A	D	G	A	N	S	Q	V	R	Q	M	A	G	I	G	V	H	A	W	Q	Y	A	Q	S	C	M	L	I	S	V	Q	C	E	N	D	P	G	.	.	.	.	.	D	S	T	W	Q	Q	F	T	P	D	G	P	R	A	F	L	P	L	F	D	N	W	A	S	L	V	W	Y	D	S	P	A	R
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.
Template Conservation
Template Sequence		R	D	Q	D	I	A	V	I	G	G	G	D	S	A	M	E	E	A	T	F	L	T	R	F	A	R	S	V	T	L	V	H	R	R	D	E	F	R	A	S	K	I	M	L	D	R	A	R	N	N	D	K	I	R	F	L	T	N	H	T	V	V	A	V	D	G	D	T	T	V	T	G	L	R	V	R	D	T	N	T
Template Known Secondary structure		T	T								S	S											T	T	T		S							S	S	S	S		S	S		T	T									T	T						S									S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	L	Q	N	M	N	M	A	Q	L	Q	A	E	I	A	K	H	F	P	S	R	L	G	Y	V	T	P	L	A	A	G	A	F	P	L	T	R	R	H	A	L	Q	Y	V	Q	P	G	L	A	L	V	G	D	A	A	H	T	I	H	P	L	A	G	Q	G	V	N	L	G	Y	R	D	V	D	A	L	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	E	T	T	L	P	V	T	G	V	F	V	A	I	G	H	E	P	R	S	G	L	V	R	E	A	I	D	V	D	P	D	G	Y	V	L	V	Q	G	R	T	T	S	T	S	L	P	G	V	F	A	A	G	D	L	V	D	R	T	Y	R	Q	A	V	T	A	A	G	S	G	C	A	A	A	I	D	A	E	R
Template Known Secondary structure		S								S						S							T	T	T	B	T	T	B		B		T	T	S		B			S	T	T	S	S	B		S	S	T	T					G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		314	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	N	A	R	S	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	A	E	H	A	A	T	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions