Job Description P23200 Confidence 97.01% Date Thu Jan 5 11:39:18 GMT 2012 Rank 2 Aligned Residues 303 % Identity 14% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	A	L	N	K	K	S	F	L	T	Y	L	K	E	G	G	I	Y	V	V	L	L	V	L	L	A	I	I	I	F	Q	D	P	T	F	L	S	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	S	N	I	L	T	Q	S	S	V	R	I	I	I	A	L	G	V	A	G	L	I	V	T	Q
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	L	A	R	Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F
Template Known Secondary structure																																	B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	D	L	S	A	G	R	Q	V	G	L	A	A	V	V	A	A	T	L	L	Q	S	M	D	N	A	N	K	V	F	P	E	M	A	T	M	P	I	A	L	V	I	L	I	V	C	A	I	G	A	V	I	G	L	I	N	G	L	I	I	A	Y	L	N	V	T	P	F	I	T	T	L	G	T	M	I	I	V	Y
Query Conservation
Alig confidence																																																																			.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		E	N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	.	.	.	.	L	A	G	V	A	L	G	I	I	C	S
Template Known Secondary structure		T		T	T			T	T	T	T	T															T	S		T	T																												T								.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	S	L	Y	Y	D	F	V	G	A	S	P	I	S	G	F	D	S	G	F	S	T	F	A	Q	G	F	V	A	L	G	S	F	R	L	S	Y	I	T	F	Y	A	L	I	A	V	A	F	V	W	V	L	W	N	K	T	R	F	G	K	N	I	F	A	I	G	G	N	P	E	A	A	K	V	S	G	V	N
Query Conservation
Alig confidence																.	.	.	.	.																																						.	.	.	.	.
Template Conservation																.	.	.	.	.																																						.	.	.	.	.
Template Sequence		A	L	X	T	W	A	I	Y	F	S	T	S	V	D	.	.	.	.	.	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	.	.	.	.	.	R	P	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P
Template Known Secondary structure																.	.	.	.	.									T				T	T			G	G	G																			.	.	.	.	.																T	T
Template Predicted Secondary structure																.	.	.	.	.																																						.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		V	G	L	N	L	L	M	I	Y	A	L	S	G	V	F	Y	A	F	G	G	M	L	E	A	.	.	G	R	I	G	S	A	T	N	N	L	G	F	M	Y	E	L	D	A	I	A	A	C	V	V	G	G	V	S	F	S	G	G	V	G	T	V	I	G	V	V	T	G	V	I	I	F	T	V	I	N	Y	G	L	T
Query Conservation																										.	.
Alig confidence																										.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	W	F	W	R	N	V	L	V	A	A	T	G	W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	.	.	.	.	.	.	.	.	.	.	.	.	P	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R
Template Known Secondary structure																													S	S	S	S									T	T			S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.													.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		305					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		Y	.	.	.	.	I	G	V	N	P	Y	W	Q	Y	I	I	K	G	A	I	I	I	F	A	V	A	L	D	S
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K	A
Template Known Secondary structure			S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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