|   |
323 | . | . | . | . | . | . | 330 | . | . | . | . | . | |
|
|
|
. | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
V | L | E | V | S | N | L | R | K | S | Y | G | D | . |
. |
. |
. |
R | L | L | I | D | D | L | S | F | S | I | P | K | G | A | I | V | G | I | I | G | P | N | G | A | G | K | S | T | L | F | R | M | I | S | G | Q | E | Q | P | D | S | G | T | I | T | L | G | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | I | K | L | K | N | V | T | K | T | Y | K | M | G | E | E | I | I | Y | A | L | K | N | V | N | L | N | I | K | E | G | E | F | V | S | I | M | G | P | S | G | S | G | K | S | T | M | L | N | I | I | G | C | L | D | K | P | T | E | G | E | V | Y | I | D | N | I | K | T | N | D | L | D | D | D | E | L | T | K | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  | T | T | S | S |
|
| S |  |  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
|
385 | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
T | V | K | L | A | S | V | D | Q | F | R | D | S | M | D | N | S | K | T | V | W | E | E | V | S | G | G | L | D | I | M | K | I | G | . |
. |
. |
. |
. |
N | T | E | M | P | S | R | A | Y | V | G | R | F | N | F | K | G | V | D | Q | G | K | R | V | G | E | L | S | G | G | E | R | G | R | L | H | L | A | K | L |
Query Conservation |   |
. |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|   |
|   |   | . |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|
|   |
|
Template Sequence |   |
R | R | D | K | I | G | F | V | F | Q | Q | F | . |
N | L | I | P | L | L | T | A | L | E | N | V | E | L | P | L | I | F | K | Y | R | G | A | M | S | G | E | E | R | R | K | R | A | L | E | C | L | K | M | A | E | L | E | E | R | F | A | N | H | K | P | N | Q | L | S | G | G | Q | Q | Q | R | V | A | I | A | R | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T |
| . |
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G | T | T |
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | |
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
459 | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | |
|
|
|
. | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | V | G | G | N | M | L | L | L | D | E | P | T | N | D | L | D | I | E | T | L | R | A | L | E | N | A | L | L | E | F | . |
. |
. |
. |
P | G | C | A | M | V | I | S | H | D | R | W | F | L | D | R | I | A | T | H | I | L | D | Y | Q | D | E | G | K | V | E | F |
Query Conservation |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . |   |   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   | . |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
Template Sequence |   |
L | A | N | N | P | P | I | I | L | A | D | Q | P | T | G | A | L | D | S | K | T | G | E | K | I | M | Q | L | L | K | K | L | N | E | E | D | G | K | T | V | V | V | V | T | H | D | I | N | V | A | . |
R | F | G | E | R | I | I | Y | L | K | D | G | E | V | E | R | E |
Template Known Secondary structure |   |
 | T | T |
|
| S |  |  |  |  |  | S | T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S |
|  |  |  |  | . | T | T | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |