Job Description P0A9W3 Confidence 100.00% Date Thu Jan 5 11:11:33 GMT 2012 Rank 53 Aligned Residues 220 % Identity 25% Template c3b5wE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Resolution 5.30 Å

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		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		R	N	E	T	N	E	L	F	I	P	P	G	P	R	L	G	D	K	V	L	E	V	S	N	L	R	K	S	Y	.	.	G	D	R	L	L	I	D	D	L	S	F	S	I	P	K	G	A	I	V	G	I	I	G	P	N	G	A	G	K	S	T	L	F	R	M	I	S	G	Q	E	Q	P	D	S	G	T	I	T	L
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		D	S	E	Q	E	K	D	E	G	K	R	V	I	E	R	A	T	G	D	V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M
Template Known Secondary structure		T	S	S							S						S							S	S		B		B		S	S	S	S		B	S	S		S							T	T							S	S	T	T	S	S								T	T	T		S			B	S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		383	.	.	.												.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	T	V	.	.	.	.	.	.	.	.	.	.	.	K	L	A	S	V	D	Q	F	R	D	S	M	D	N	S	K	T	V	W	E	E	V	S	G	G	L	D	I	M	K	I	G	N	T	E	M	P	S	R	A	Y	V	G	R	F	N	F	K	G	V	D	Q	G	K	R	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.										.	.																		.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																		.	.	.
Template Sequence		D	G	H	D	L	R	E	Y	T	L	A	S	L	R	N	Q	V	A	L	V	S	Q	N	V	.	.	H	L	F	N	D	T	V	A	N	N	I	A	Y	A	R	T	E	.	.	.	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N
Template Known Secondary structure		S	S	S	B	T	T	T	S							T	T						S			.	.				S	S		B	S	T	T	T	T	S	S	S	S	T	.	.	.	T	S			T	T					T	T	T	T	S	T					T	T	S	S	S	S	S	B					T	T
Template Predicted Secondary structure																										.	.																		.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.				.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490			.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		V	G	E	L	S	G	G	E	R	G	R	L	H	L	A	K	L	L	Q	V	G	G	N	M	L	L	L	D	E	P	T	N	D	L	D	I	E	T	L	R	A	L	E	N	A	L	L	E	F	.	.	P	G	C	A	M	V	I	S	H	D	R	W	F	L	D	R	I	A	T	H	I	L	D	Y	Q	D	E	G	K
Query Conservation																																																			.	.
Alig confidence																																																			.	.																	.
Template Conservation																																																																					.
Template Sequence		G	V	L	L	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	L	R	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	L	Q	K	N	R	T	S	L	V	I	A	H	R	L	S	T	I	E	K	.	A	D	E	I	V	V	V	E	D	G	V	I
Template Known Secondary structure		S		S	S										T					T	S			S							T	T	S	S									T	T					T	T	T	S	S	S							S	S	G	G	G	T	T	T	.		S	S	B					T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	F	F	E	G	N	F	T	E	Y	E	E
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		V	E	R	.	.	G	T	H	N	D	L	L	E
Template Known Secondary structure					.	.		S	S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		557	.	.			560	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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