Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9W3
Confidence97.42%DateThu Jan 5 11:11:33 GMT 2012
Rank115Aligned Residues122
% Identity16%Templatec2vyeA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   346...350.........360.........370.........380.........390.........400.........410.........420.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  IPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSR
Query Conservation 
  

   
 
 








  
 
      
 
       
    
    
    

   
                 
Alig confidence 

































.......








......................







Template Conservation     
 
  
 
  
 


      
   
     ....... 

  
 
 ......................       
Template Sequence  FQRSDLIIVAARPSVGKTAFALNIAQNVATKTNE. . . . . . . NVAIFSLEM. . . . . . . . . . . . . . . . . . . . . . SAQQLVMR
Template Known Secondary structure  B
TT


STTTS
S.......SSS......................
Template Predicted Secondary structure 












.......


......................
Template SS confidence 















































































   200.........210.........220.........230... ......240.. .......250
 
   426...430.........440.........450.........460.........470.........480.........490.........
Predicted Secondary structure 























Query SS confidence 









































































Query Sequence  AYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISH
Query Conservation    
    
           




 


 

  
   
 







 


      
   
     


 


Alig confidence 














..

































.





















Template Conservation                 ..                 
      
         .     
          




 
Template Sequence  MLCAEGNINAQNLRT. . GKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVS. DIRAKCRRLKQESGLGMVVIDY
Template Known Secondary structure  T

T..T


TS



SS
B.T

Template Predicted Secondary structure 




..











.




Template SS confidence 









































































   251........260..... ....270.........280.........290......... 300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions