Job Description P0A9W3 Confidence 100.00% Date Thu Jan 5 11:11:33 GMT 2012 Rank 16 Aligned Residues 216 % Identity 30% Template c2it1B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii Resolution 1.94 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	M	H	R	V	G	K	V	V	P	P	K	R	H	I	L	K	N	I	S	L	S	F	F	P	G	A	K	I	G	V	L	G	L	N	G	A	G	K	S	T	L	L	R	I	M	A	G	I	D	K	D	I	E	G	E	A	R	P	Q	P	.	.	.	.	.	.	.	.	.	D	I	K	I	G	Y	L	P	Q
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence													.																																																			.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		I	K	L	E	N	I	V	K	K	F	G	.	N	F	T	A	L	N	N	I	N	L	K	I	K	D	G	E	F	M	A	L	L	G	P	S	G	S	G	K	S	T	L	L	Y	T	I	A	G	I	Y	K	P	T	S	G	K	I	Y	F	D	E	K	D	V	T	E	L	P	P	K	D	R	N	V	G	L	V	F	Q
Template Known Secondary structure												T	.	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S						T						T
Template Predicted Secondary structure													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	P	Q	L	N	P	E	H	T	V	R	E	S	I	E	E	A	V	S	E	V	V	N	A	L	K	R	L	D	E	V	Y	A	L	Y	A	D	P	D	A	D	F	D	K	L	A	A	E	Q	G	R	L	E	E	I	I	Q	A	H	D	G	H	N	L	N	V	Q	L	E	R	A	A	D	A	L	R	L	P	D	.
Query Conservation																																																																																	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	W	A	L	Y	P	H	M	T	V	Y	K	N	I	A	F	P	L	E	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	P	R	E	E	I	D	K	K	V	R	E	V	A	K	M	L	H	I	D	K	L
Template Known Secondary structure		T					T	T	S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																	T	T		G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																																					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		W	D	A	K	I	A	N	L	S	G	G	E	R	R	R	V	A	L	C	R	L	L	L	E	K	P	D	M	L	L	L	D	E	P	T	N	H	L	D	A	E	S	V	A	W	L	E	R	F	L	.	.	.	.	H	D	F	E	G	T	V	V	A	I	T	H	D	R	Y	F	L	D	N	V	A	G	W	I	L	E
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.
Template Conservation
Template Sequence		L	N	R	Y	P	W	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	V	K	E	P	E	V	L	L	L	D	E	P	L	S	N	L	D	A	L	L	R	L	E	V	R	A	E	L	K	R	L	Q	K	E	L	G	I	T	T	V	Y	V	T	H	D	Q	A	E	A	L	A	M	A	D	R	I	A	V
Template Known Secondary structure		T	T	S		G	G	G	S															T	T			S						S	G	G	G	G	S																				T								S										S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	G	E	G	I	P	W	E	G	N	Y	S	S	W	L	E	Q	K	D	Q	R	L	A	Q	E	A
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		I	R	E	G	E	I	L	Q	.	V	G	T	P	D	E	V	Y	Y	K	P	K	Y	K	F	V	G	G	F
Template Known Secondary structure				T	T					.										S		S	B
Template Predicted Secondary structure										.
Template SS confidence
		207	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions