Job Description P0A9W3 Confidence 100.00% Date Thu Jan 5 11:11:33 GMT 2012 Rank 1 Aligned Residues 441 % Identity 25% Template c1yqtA_ PDB info PDB header:hydrolyase/translation Chain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	V	G	K	V	V	P	P	K	R	H	I	L	K	N	I	S	L	S	F	F	P	G	A	K	I	G	V	L	G	L	N	G	A	G	K	S	T	L	L	R	I	M	A	G	I	D	K	D	I	E	G	E	A	R	P	Q	P	D	I	K	I	G	Y	L	P	Q	E	P	Q	L	N	P	E	H	T	V	R	E
Query Conservation
Alig confidence										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	C	V	H	R	Y	G	.	V	N	A	F	V	L	Y	R	L	P	V	V	K	E	G	X	V	V	G	I	V	G	P	N	G	T	G	K	S	T	A	V	K	I	L	A	G	Q	L	I	P	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	D	N	D	S	W	D
Template Known Secondary structure									S	.	T	T												T	T	S								T	T	S	S										T	S	S				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			S
Template Predicted Secondary structure										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																					.	.	130	.	.	.	.	.
		89	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.
Predicted Secondary structure									.	.	.	.																																																													.
Query SS confidence									.	.	.	.																																																													.
Query Sequence		S	I	E	E	A	V	S	.	.	.	.	E	V	V	N	A	L	K	R	L	D	E	V	Y	A	L	Y	A	D	P	D	A	D	F	D	K	L	A	A	E	Q	G	R	L	E	E	I	I	Q	A	H	D	G	H	N	L	N	V	Q	L	E	R	A	A	D	A	L	R	L	P	D	.	W	D	A	K	I	A	N	L
Query Conservation									.	.	.	.																																																													.
Alig confidence									.	.	.	.																															.	.	.	.																											.
Template Conservation																																											.	.	.	.
Template Sequence		G	V	I	R	A	F	R	G	N	E	L	Q	N	Y	F	E	K	L	K	N	G	E	I	R	P	V	V	K	P	Q	Y	V	D	L	I	P	K	A	V	K	G	.	.	.	.	K	V	I	E	L	L	K	K	A	D	E	T	G	K	L	E	E	V	V	K	A	L	E	L	E	N	V	L	E	R	E	I	Q	H	L
Template Known Secondary structure							T	T	T	S	T										T	T	S								S		G	G	G	S	G	G	G			S	.	.	.	.	B										S	S	S									T	T		T	T	T	T	T	S	B	G	G	G
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		S	G	G	E	R	R	R	V	A	L	C	R	L	L	L	E	K	P	D	M	L	L	L	D	E	P	T	N	H	L	D	A	E	S	V	A	W	L	E	R	F	.	.	.	L	H	D	F	E	G	T	V	V	A	I	T	H	D	R	Y	F	L	D	N	V	A	G	W	I	L	E	L	D	R	G	E	G	I	P	W
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.																															.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		S	G	G	E	L	Q	R	V	A	I	A	A	A	L	L	R	N	A	T	F	Y	F	F	D	E	P	S	S	Y	L	D	I	R	Q	R	L	N	A	A	R	A	I	R	R	L	S	E	E	G	K	S	V	L	V	V	E	H	D	L	A	V	L	D	Y	L	S	D	I	I	H	V	V	Y	G	.	.	.	.	.	E
Template Known Secondary structure																	S			S						S	T	T	T	T																			T	T								S										S								.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	N	Y	S	S	W	L	E	Q	K	D	Q	R	L	A	Q	E	A	S	Q	E	A	A	R	R	K	S	I	E	K	E	L	E	W	V	R	Q	G	T	K	G	R	Q	S	K	G	K	A	R	L	A	R	F	E	E	L	N	S	T	E	Y	Q	K	R	N	E	T	N	E	L	F	I	P	P	G	P	R	L	G
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	V	Y	G	I	F	S	Q	P	K	G	T	R	N	G	I	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	Y	L	K	D	E	N	V	R	F	R	P	Y	E	I	K	F	T	K	T	G	E	R	V	E	I	E	R
Template Known Secondary structure		T	T	T																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T			T	T	T	T				S	S	S							S	S	G	G	G	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.																															.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	L	E	V	S	N	L	R	K	S	Y	G	D	R	L	L	I	D	D	L	S	F	S	I	P	K	G	A	I	V	G	I	I	G	P	N	G	A	G	K	S	T	L	F	R	M	I	S	G	Q	E	Q	P	D	S	G	T	I	T	L	G	E	T	V	K	L	A	S	V	D	Q	F	R	D	S	M	D	N
Query Conservation
Alig confidence																	.																																																	.	.										.
Template Conservation																	.																																																	.	.										.
Template Sequence		E	T	L	V	T	Y	P	R	L	V	K	D	Y	G	S	.	F	R	L	E	V	E	P	G	E	I	K	K	G	E	V	I	G	I	V	G	P	N	G	I	G	K	T	T	F	V	K	X	L	A	G	V	E	E	P	T	E	G	K	I	E	W	D	L	.	.	T	V	A	Y	K	P	Q	Y	I	.	K	A	D	Y
Template Known Secondary structure															T	T	.												T	T									T	T	S	S										T	S	S			S	B								.	.							S	S		.
Template Predicted Secondary structure																	.																																																	.	.										.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.	.	.	.		.	410	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	T	V	W	E	E	V	S	G	G	L	D	I	M	K	I	G	N	T	E	M	P	S	R	A	Y	V	G	R	F	N	F	K	G	V	D	Q	G	K	R	V	G	E	L	S	G	G	E	R	G	R	L	H	L	A	K	L	L	Q	V	G	G	N	M	L	L	L	D	E	P	T	N	D	L	D	I	E	T	L
Query Conservation
Alig confidence																	.	.																		.
Template Conservation																	.	.																		.
Template Sequence		E	G	T	V	Y	E	L	L	S	K	I	D	A	S	K	.	.	L	N	S	N	F	Y	K	T	E	L	L	K	P	L	G	I	I	.	D	L	Y	D	R	E	V	N	E	L	S	G	G	E	L	Q	R	V	A	I	A	A	T	L	L	R	D	A	D	I	Y	L	L	D	E	P	S	A	Y	L	D	V	E	Q	R
Template Known Secondary structure		S	S	B													.	.		T								T	T	T	T	T	T		G	.	G	G	T	T	S	B	G	G	G																T	S			S							T	T	T	T
Template Predicted Secondary structure																	.	.																		.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490					.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		R	A	L	E	N	A	L	L	E	F	.	.	.	.	P	G	C	A	M	V	I	S	H	D	R	W	F	L	D	R	I	A	T	H	I	L	D	Y	Q	D
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		L	A	V	S	R	A	I	R	H	L	X	E	K	N	E	K	T	A	L	V	V	E	H	D	V	L	X	I	D	Y	V	S	D	R	L	X	V	F	E	G
Template Known Secondary structure																T								S										S
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.